ECA348

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Strains

  • ECA348

Variation

Soft-Filter Hard-Filter
Variant Calls 3,870,317 2,722,158
Homozygous reference genotype 3,759,585 2,642,564
Heterozygous genotype 27,817 0
Homozogyous alternative genotype 82,915 79,594
Missing genotype call 251,676 183,977
Singletons 1,589 1,034
Data in the table above are for the reference strain.
Summary
  • Isotype
    ECA348
  • Reference Strain
    ECA348
  • Release
    2017-05-31
  • Isolation Date
    2015-12-30
  • Latitude, Longitude
    37.775334, -122.253889
  • Elevation
    4.0 m
  • Landscape
    Urban garden
  • Substrate
    Rotting fruit
  • Sampled By
    S. Zdraljevic
  • Substrate Temperature (C)
  • Substrate Moisture (%)
  • Ambient Temperature (C)
  • Ambient Humidity (%)
  • Data in this table is for the reference strain.



1.2.9